Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Traf3Q60803 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.1□□□□□ -0.15
Traf3Q60803 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm7653-201ENSMUST00000214567 508 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 Gm26315-201ENSMUST00000083890 321 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.1□□□□□ -0.15
Traf3Q60803 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Traf3Q60803 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Traf3Q60803 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Traf3Q60803 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Traf3Q60803 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Traf3Q60803 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Traf3Q60803 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.09□□□□□ -0.15
Traf3Q60803 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.09□□□□□ -0.15
Traf3Q60803 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.09□□□□□ -0.15
Traf3Q60803 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Traf3Q60803 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Traf3Q60803 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Traf3Q60803 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Traf3Q60803 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Traf3Q60803 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.08□□□□□ -0.15
Traf3Q60803 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.08□□□□□ -0.15
Traf3Q60803 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Traf3Q60803 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Gm12928-201ENSMUST00000117115 573 ntBASIC14.08□□□□□ -0.16
Traf3Q60803 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Traf3Q60803 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.08□□□□□ -0.16
Traf3Q60803 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Traf3Q60803 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms