Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
ClpbQ60649 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
ClpbQ60649 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ClpbQ60649 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.96□□□□□ -0.33
ClpbQ60649 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ClpbQ60649 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClpbQ60649 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.34
ClpbQ60649 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.96□□□□□ -0.34
ClpbQ60649 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.96□□□□□ -0.34
ClpbQ60649 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
ClpbQ60649 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClpbQ60649 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
ClpbQ60649 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Gm14928-201ENSMUST00000120198 477 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Gm13385-201ENSMUST00000121089 220 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.95□□□□□ -0.34
ClpbQ60649 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.95□□□□□ -0.34
ClpbQ60649 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Gm5279-201ENSMUST00000199575 745 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Gm9794-201ENSMUST00000202370 423 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Gm44719-201ENSMUST00000206404 149 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Gm18624-201ENSMUST00000220966 658 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ClpbQ60649 Mir497b-201ENSMUST00000093601 125 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
ClpbQ60649 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClpbQ60649 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ClpbQ60649 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
ClpbQ60649 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.95□□□□□ -0.34
ClpbQ60649 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.95□□□□□ -0.34
ClpbQ60649 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ClpbQ60649 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ClpbQ60649 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.94□□□□□ -0.34
ClpbQ60649 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Gm12091-201ENSMUST00000146791 830 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.94□□□□□ -0.34
ClpbQ60649 Gm23984-201ENSMUST00000157139 203 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Gm24420-201ENSMUST00000176676 59 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Gm8927-201ENSMUST00000181978 981 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Mir6392-201ENSMUST00000184924 108 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Gm45668-201ENSMUST00000211271 493 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.94□□□□□ -0.34
ClpbQ60649 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Gm3222-201ENSMUST00000071282 990 ntBASIC12.94□□□□□ -0.34
ClpbQ60649 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ClpbQ60649 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.94□□□□□ -0.34
ClpbQ60649 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClpbQ60649 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms