Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm5364-201ENSMUST00000216789 889 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Mir125a-201ENSMUST00000083545 68 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm18057-201ENSMUST00000208220 503 ntBASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms