Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Gm12208-201ENSMUST00000122004 163 ntBASIC16.36■□□□□ 0.21
Shank3Q4ACU6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank3Q4ACU6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm13045-201ENSMUST00000119019 712 ntBASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.35■□□□□ 0.21
Shank3Q4ACU6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm6963-201ENSMUST00000147879 379 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm16296-201ENSMUST00000159905 325 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank3Q4ACU6 Gm13296-201ENSMUST00000117854 997 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Mir339-201ENSMUST00000083659 96 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.33■□□□□ 0.21
Shank3Q4ACU6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms