Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm2445-201ENSMUST00000182798 989 ntBASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm9682-201ENSMUST00000197505 556 ntBASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm5587-201ENSMUST00000206270 674 ntBASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.65□□□□□ -0.87
Cks1brtQ3UNC9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm6345-202ENSMUST00000180900 204 ntBASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms