Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Gm11803-201ENSMUST00000119966 444 ntBASIC11.71□□□□□ -0.53
Q3U1D9 Gm22331-201ENSMUST00000158066 136 ntBASIC11.71□□□□□ -0.53
Q3U1D9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
Q3U1D9 Gm27731-201ENSMUST00000185192 107 ntBASIC11.71□□□□□ -0.53
Q3U1D9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.71□□□□□ -0.53
Q3U1D9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Q3U1D9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Q3U1D9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Q3U1D9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.54
Q3U1D9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Q3U1D9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.7□□□□□ -0.54
Q3U1D9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.7□□□□□ -0.54
Q3U1D9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Q3U1D9 Gm14660-201ENSMUST00000119809 575 ntBASIC11.7□□□□□ -0.54
Q3U1D9 Gm10156-201ENSMUST00000122364 462 ntBASIC11.7□□□□□ -0.54
Q3U1D9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.7□□□□□ -0.54
Q3U1D9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.7□□□□□ -0.54
Q3U1D9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.7□□□□□ -0.54
Q3U1D9 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.7□□□□□ -0.54
Q3U1D9 Gm43818-201ENSMUST00000200605 466 ntBASIC11.7□□□□□ -0.54
Q3U1D9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.7□□□□□ -0.54
Q3U1D9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.7□□□□□ -0.54
Q3U1D9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Q3U1D9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Q3U1D9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Q3U1D9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Q3U1D9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Q3U1D9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Gm12957-201ENSMUST00000117835 377 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.69□□□□□ -0.54
Q3U1D9 Gm8810-201ENSMUST00000172895 754 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Proscos-202ENSMUST00000178990 666 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Gm8598-201ENSMUST00000221184 836 ntBASIC11.69□□□□□ -0.54
Q3U1D9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms