Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ptchd3Q0EEE2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ptchd3Q0EEE2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Gm9719-201ENSMUST00000162765 543 ntBASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ptchd3Q0EEE2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gm6415-201ENSMUST00000118488 348 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gm45453-201ENSMUST00000211758 853 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms