Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Tff1Q08423 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Tff1Q08423 Gm12490-201ENSMUST00000120255 560 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Gm14719-201ENSMUST00000121891 340 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Gm15487-201ENSMUST00000122373 465 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.23□□□□□ -0.61
Tff1Q08423 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.23□□□□□ -0.61
Tff1Q08423 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Gm29741-201ENSMUST00000192667 421 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 AA619741-201ENSMUST00000195095 646 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.23□□□□□ -0.61
Tff1Q08423 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Syt7-204ENSMUST00000223586 1344 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Tff1Q08423 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tff1Q08423 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 Gm29541-201ENSMUST00000191351 678 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 Gm37714-201ENSMUST00000194742 342 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.22□□□□□ -0.61
Tff1Q08423 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.22□□□□□ -0.61
Tff1Q08423 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.22□□□□□ -0.61
Tff1Q08423 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tff1Q08423 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tff1Q08423 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tff1Q08423 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tff1Q08423 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.21□□□□□ -0.61
Tff1Q08423 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.21□□□□□ -0.61
Tff1Q08423 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.21□□□□□ -0.61
Tff1Q08423 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tff1Q08423 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.21□□□□□ -0.61
Tff1Q08423 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms