Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm12403-201ENSMUST00000121384 959 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm18624-201ENSMUST00000220966 658 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm15823-201ENSMUST00000064305 670 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.84□□□□□ -0.51
Thbs3Q05895 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Thbs3Q05895 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.84□□□□□ -0.51
Thbs3Q05895 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Thbs3Q05895 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Gm15371-201ENSMUST00000117057 784 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Mir6392-201ENSMUST00000184924 108 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 Gm38223-201ENSMUST00000194484 695 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 Gm42550-201ENSMUST00000201553 960 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Thbs3Q05895 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.83□□□□□ -0.52
Thbs3Q05895 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Thbs3Q05895 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Thbs3Q05895 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Thbs3Q05895 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Thbs3Q05895 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Thbs3Q05895 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Thbs3Q05895 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.82□□□□□ -0.52
Thbs3Q05895 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms