Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm38144-201ENSMUST00000192790 465 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm18062-201ENSMUST00000208020 547 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm18055-201ENSMUST00000208254 547 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm26315-201ENSMUST00000083890 321 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col6a2Q02788 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a2Q02788 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a2Q02788 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a2Q02788 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.46□□□□□ -0.26
Col6a2Q02788 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col6a2Q02788 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col6a2Q02788 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a2Q02788 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a2Q02788 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col6a2Q02788 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm6152-201ENSMUST00000151704 340 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm27847-201ENSMUST00000183711 107 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm27375-201ENSMUST00000183799 107 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.45□□□□□ -0.26
Col6a2Q02788 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Gm18473-201ENSMUST00000220543 868 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.45□□□□□ -0.26
Col6a2Q02788 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a2Q02788 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a2Q02788 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Col6a2Q02788 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm43438-201ENSMUST00000198133 379 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.44□□□□□ -0.26
Col6a2Q02788 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Itm2b-204ENSMUST00000228637 783 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Gm6091-201ENSMUST00000098307 165 ntBASIC13.44□□□□□ -0.26
Col6a2Q02788 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col6a2Q02788 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms