Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm15371-201ENSMUST00000117057 784 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm14127-201ENSMUST00000117906 678 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm13829-201ENSMUST00000119600 138 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm15376-201ENSMUST00000122258 783 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm25857-201ENSMUST00000082788 129 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm5356-201ENSMUST00000093326 615 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.76□□□□□ -0.37
Nkx3-2P97503 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx3-2P97503 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.75□□□□□ -0.37
Nkx3-2P97503 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.75□□□□□ -0.37
Nkx3-2P97503 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm15429-201ENSMUST00000151268 798 ntBASIC12.75□□□□□ -0.37
Nkx3-2P97503 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm6244-201ENSMUST00000178732 841 ntBASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms