Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.3□□□□□ -0.6
SgcaP82350 Gm18195-201ENSMUST00000207604 706 ntBASIC11.3□□□□□ -0.6
SgcaP82350 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcaP82350 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.29□□□□□ -0.6
SgcaP82350 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SgcaP82350 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.29□□□□□ -0.6
SgcaP82350 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SgcaP82350 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SgcaP82350 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.29□□□□□ -0.6
SgcaP82350 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.29□□□□□ -0.6
SgcaP82350 Gm7461-201ENSMUST00000058918 827 ntBASIC11.29□□□□□ -0.6
SgcaP82350 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.29□□□□□ -0.6
SgcaP82350 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SgcaP82350 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SgcaP82350 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.28□□□□□ -0.6
SgcaP82350 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.28□□□□□ -0.6
SgcaP82350 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SgcaP82350 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Gm13884-201ENSMUST00000118103 829 ntBASIC11.28□□□□□ -0.6
SgcaP82350 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SgcaP82350 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.28□□□□□ -0.6
SgcaP82350 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms