Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SgcbP82349 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.03□□□□□ -0.48
SgcbP82349 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.03□□□□□ -0.48
SgcbP82349 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Gm27701-201ENSMUST00000184498 110 ntBASIC12.03□□□□□ -0.48
SgcbP82349 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SgcbP82349 Gm28911-201ENSMUST00000188837 117 ntBASIC12.03□□□□□ -0.48
SgcbP82349 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Gm38223-201ENSMUST00000194484 695 ntBASIC12.03□□□□□ -0.48
SgcbP82349 Gm45384-201ENSMUST00000210451 277 ntBASIC12.03□□□□□ -0.48
SgcbP82349 Gm2594-201ENSMUST00000214774 742 ntBASIC12.03□□□□□ -0.48
SgcbP82349 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SgcbP82349 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SgcbP82349 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcbP82349 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcbP82349 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SgcbP82349 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
SgcbP82349 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcbP82349 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgcbP82349 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.02□□□□□ -0.49
SgcbP82349 Gm36991-201ENSMUST00000191800 648 ntBASIC12.02□□□□□ -0.49
SgcbP82349 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.02□□□□□ -0.49
SgcbP82349 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.02□□□□□ -0.49
SgcbP82349 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.02□□□□□ -0.49
SgcbP82349 Gm17330-201ENSMUST00000221047 165 ntBASIC12.02□□□□□ -0.49
SgcbP82349 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.02□□□□□ -0.49
SgcbP82349 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.02□□□□□ -0.49
SgcbP82349 Gm24447-201ENSMUST00000083977 338 ntBASIC12.02□□□□□ -0.49
SgcbP82349 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SgcbP82349 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SgcbP82349 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcbP82349 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcbP82349 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.01□□□□□ -0.49
SgcbP82349 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
SgcbP82349 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SgcbP82349 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.01□□□□□ -0.49
SgcbP82349 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcbP82349 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Gm12138-201ENSMUST00000122180 951 ntBASIC12.01□□□□□ -0.49
SgcbP82349 Gm15429-201ENSMUST00000151268 798 ntBASIC12.01□□□□□ -0.49
SgcbP82349 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms