Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.93□□□□□ -0.18
Smad1P70340 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smad1P70340 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Smad1P70340 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.92□□□□□ -0.18
Smad1P70340 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smad1P70340 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.92□□□□□ -0.18
Smad1P70340 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.92□□□□□ -0.18
Smad1P70340 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Gm9899-201ENSMUST00000065519 555 ntBASIC13.92□□□□□ -0.18
Smad1P70340 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smad1P70340 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Mir497b-201ENSMUST00000093601 125 ntBASIC13.92□□□□□ -0.18
Smad1P70340 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smad1P70340 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.92□□□□□ -0.18
Smad1P70340 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smad1P70340 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smad1P70340 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smad1P70340 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.91□□□□□ -0.18
Smad1P70340 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.91□□□□□ -0.18
Smad1P70340 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.91□□□□□ -0.18
Smad1P70340 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.91□□□□□ -0.18
Smad1P70340 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.91□□□□□ -0.18
Smad1P70340 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smad1P70340 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smad1P70340 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smad1P70340 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Smad1P70340 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smad1P70340 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smad1P70340 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms