Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Gm22189-201ENSMUST00000103822 86 ntBASIC11.25□□□□□ -0.61
Pdlim4P70271 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Gm7488-201ENSMUST00000117148 684 ntBASIC11.25□□□□□ -0.61
Pdlim4P70271 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Gm27772-201ENSMUST00000184900 187 ntBASIC11.25□□□□□ -0.61
Pdlim4P70271 Gm44719-201ENSMUST00000206404 149 ntBASIC11.25□□□□□ -0.61
Pdlim4P70271 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdlim4P70271 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdlim4P70271 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Gm15240-201ENSMUST00000118156 720 ntBASIC11.24□□□□□ -0.61
Pdlim4P70271 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.24□□□□□ -0.61
Pdlim4P70271 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.24□□□□□ -0.61
Pdlim4P70271 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.24□□□□□ -0.61
Pdlim4P70271 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.24□□□□□ -0.61
Pdlim4P70271 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pdlim4P70271 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdlim4P70271 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.23□□□□□ -0.61
Pdlim4P70271 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pdlim4P70271 Gm19220-201ENSMUST00000222682 803 ntBASIC11.23□□□□□ -0.61
Pdlim4P70271 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdlim4P70271 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms