Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.23□□□□□ -0.29
Lhx1P63006 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lhx1P63006 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.23□□□□□ -0.29
Lhx1P63006 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.23□□□□□ -0.29
Lhx1P63006 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lhx1P63006 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lhx1P63006 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lhx1P63006 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lhx1P63006 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.22□□□□□ -0.29
Lhx1P63006 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.22□□□□□ -0.29
Lhx1P63006 Gm29649-201ENSMUST00000185649 419 ntBASIC13.22□□□□□ -0.29
Lhx1P63006 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.22□□□□□ -0.29
Lhx1P63006 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Lhx1P63006 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lhx1P63006 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Lhx1P63006 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lhx1P63006 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm12390-201ENSMUST00000117897 397 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.21□□□□□ -0.29
Lhx1P63006 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.21□□□□□ -0.29
Lhx1P63006 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.21□□□□□ -0.29
Lhx1P63006 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Lhx1P63006 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm18062-201ENSMUST00000208020 547 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm18055-201ENSMUST00000208254 547 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm7561-201ENSMUST00000211203 886 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm25857-201ENSMUST00000082788 129 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.21□□□□□ -0.29
Lhx1P63006 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx1P63006 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.21□□□□□ -0.29
Lhx1P63006 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.21□□□□□ -0.3
Lhx1P63006 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Lhx1P63006 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.21□□□□□ -0.3
Lhx1P63006 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Lhx1P63006 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.21□□□□□ -0.3
Lhx1P63006 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx1P63006 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx1P63006 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms