Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm3P62311 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gm16198-201ENSMUST00000118766 670 ntBASIC12.25□□□□□ -0.45
Lsm3P62311 Gm15173-201ENSMUST00000122049 433 ntBASIC12.25□□□□□ -0.45
Lsm3P62311 Gm6659-201ENSMUST00000174752 547 ntBASIC12.25□□□□□ -0.45
Lsm3P62311 Gm27357-201ENSMUST00000183754 135 ntBASIC12.25□□□□□ -0.45
Lsm3P62311 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm3P62311 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm3P62311 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Lsm3P62311 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.25□□□□□ -0.45
Lsm3P62311 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Lsm3P62311 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm3P62311 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm3P62311 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lsm3P62311 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.24□□□□□ -0.45
Lsm3P62311 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.24□□□□□ -0.45
Lsm3P62311 Gm15483-201ENSMUST00000120338 456 ntBASIC12.24□□□□□ -0.45
Lsm3P62311 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.24□□□□□ -0.45
Lsm3P62311 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.24□□□□□ -0.45
Lsm3P62311 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.24□□□□□ -0.45
Lsm3P62311 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Lsm3P62311 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.24□□□□□ -0.45
Lsm3P62311 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm3P62311 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Lsm3P62311 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm3P62311 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.23□□□□□ -0.45
Lsm3P62311 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms