Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cdh11P55288 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm14719-201ENSMUST00000121891 340 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm27838-201ENSMUST00000184829 128 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm16476-201ENSMUST00000221544 139 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm2423-201ENSMUST00000074863 733 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.31□□□□□ -0.44
Cdh11P55288 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh11P55288 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh11P55288 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.3□□□□□ -0.44
Cdh11P55288 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdh11P55288 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.3□□□□□ -0.44
Cdh11P55288 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh11P55288 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cdh11P55288 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh11P55288 Gm16215-201ENSMUST00000161990 637 ntBASIC12.3□□□□□ -0.44
Cdh11P55288 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh11P55288 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Cdh11P55288 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.3□□□□□ -0.44
Cdh11P55288 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.3□□□□□ -0.44
Cdh11P55288 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cdh11P55288 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh11P55288 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh11P55288 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms