Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pdx1P52946 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.34□□□□□ -0.27
Pdx1P52946 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pdx1P52946 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdx1P52946 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdx1P52946 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
Pdx1P52946 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdx1P52946 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pdx1P52946 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Pdx1P52946 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pdx1P52946 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pdx1P52946 Grk6-205ENSMUST00000224653 2976 ntBASIC13.33□□□□□ -0.28
Pdx1P52946 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdx1P52946 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.33□□□□□ -0.28
Pdx1P52946 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pdx1P52946 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pdx1P52946 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.33□□□□□ -0.28
Pdx1P52946 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.33□□□□□ -0.28
Pdx1P52946 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pdx1P52946 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Gm23984-201ENSMUST00000157139 203 ntBASIC13.33□□□□□ -0.28
Pdx1P52946 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.33□□□□□ -0.28
Pdx1P52946 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdx1P52946 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdx1P52946 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdx1P52946 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.32□□□□□ -0.28
Pdx1P52946 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.32□□□□□ -0.28
Pdx1P52946 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.32□□□□□ -0.28
Pdx1P52946 Gm6180-201ENSMUST00000065243 498 ntBASIC13.32□□□□□ -0.28
Pdx1P52946 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pdx1P52946 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdx1P52946 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdx1P52946 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pdx1P52946 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.31□□□□□ -0.28
Pdx1P52946 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdx1P52946 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms