Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl11P48298 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccl11P48298 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl11P48298 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ccl11P48298 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccl11P48298 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccl11P48298 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm12742-201ENSMUST00000117326 410 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Gm13226-201ENSMUST00000117838 404 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Gm24644-201ENSMUST00000157114 139 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Gm24196-201ENSMUST00000179161 110 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Gm27731-201ENSMUST00000185192 107 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.41□□□□□ -0.58
Ccl11P48298 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl11P48298 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccl11P48298 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl11P48298 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.4□□□□□ -0.58
Ccl11P48298 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ccl11P48298 Gm5687-201ENSMUST00000118252 640 ntBASIC11.4□□□□□ -0.58
Ccl11P48298 Gm11803-201ENSMUST00000119966 444 ntBASIC11.4□□□□□ -0.58
Ccl11P48298 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Gm8810-201ENSMUST00000172895 754 ntBASIC11.4□□□□□ -0.58
Ccl11P48298 Gm45784-201ENSMUST00000188360 142 ntBASIC11.4□□□□□ -0.58
Ccl11P48298 Gm45841-201ENSMUST00000207700 164 ntBASIC11.4□□□□□ -0.58
Ccl11P48298 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.4□□□□□ -0.58
Ccl11P48298 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl11P48298 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl11P48298 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Ccl11P48298 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl11P48298 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl11P48298 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl11P48298 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccl11P48298 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl11P48298 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl11P48298 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl11P48298 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl11P48298 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.39□□□□□ -0.59
Ccl11P48298 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms