Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.18□□□□□ -0.3
Gli1P47806 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Gli1P47806 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Gli1P47806 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Gm15321-201ENSMUST00000121290 288 ntBASIC13.18□□□□□ -0.3
Gli1P47806 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Gm6745-201ENSMUST00000199216 526 ntBASIC13.18□□□□□ -0.3
Gli1P47806 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.18□□□□□ -0.3
Gli1P47806 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gli1P47806 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.18□□□□□ -0.3
Gli1P47806 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gli1P47806 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gli1P47806 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gli1P47806 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Gli1P47806 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gli1P47806 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gli1P47806 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gli1P47806 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.17□□□□□ -0.3
Gli1P47806 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Gli1P47806 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.17□□□□□ -0.3
Gli1P47806 Gm23984-201ENSMUST00000157139 203 ntBASIC13.17□□□□□ -0.3
Gli1P47806 Gm9719-201ENSMUST00000162765 543 ntBASIC13.17□□□□□ -0.3
Gli1P47806 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.17□□□□□ -0.3
Gli1P47806 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.17□□□□□ -0.3
Gli1P47806 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gli1P47806 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gli1P47806 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gli1P47806 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Gli1P47806 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.16□□□□□ -0.3
Gli1P47806 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.16□□□□□ -0.3
Gli1P47806 Gm24694-201ENSMUST00000180054 110 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gli1P47806 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gli1P47806 Gm27663-201ENSMUST00000184839 110 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm29310-201ENSMUST00000185468 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21825-201ENSMUST00000185728 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm29109-201ENSMUST00000185895 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21896-201ENSMUST00000186520 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21873-201ENSMUST00000186728 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21794-201ENSMUST00000187056 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21880-201ENSMUST00000187275 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21826-201ENSMUST00000187451 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21198-201ENSMUST00000188393 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21749-201ENSMUST00000189343 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21901-201ENSMUST00000189568 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm29424-201ENSMUST00000189716 696 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm28599-201ENSMUST00000189838 694 ntBASIC13.16□□□□□ -0.3
Gli1P47806 Gm21867-201ENSMUST00000189917 696 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms