Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm15770-201ENSMUST00000117498 584 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm16177-201ENSMUST00000120728 718 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.74□□□□□ -0.37
Nkx2-6P43688 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-6P43688 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.73□□□□□ -0.37
Nkx2-6P43688 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Gm27331-201ENSMUST00000183705 60 ntBASIC12.73□□□□□ -0.37
Nkx2-6P43688 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.73□□□□□ -0.37
Nkx2-6P43688 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.73□□□□□ -0.37
Nkx2-6P43688 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-6P43688 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx2-6P43688 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-6P43688 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms