Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.08□□□□□ -0.32
TfamP40630 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TfamP40630 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TfamP40630 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TfamP40630 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.07□□□□□ -0.32
TfamP40630 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.07□□□□□ -0.32
TfamP40630 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TfamP40630 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.07□□□□□ -0.32
TfamP40630 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TfamP40630 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TfamP40630 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TfamP40630 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TfamP40630 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TfamP40630 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TfamP40630 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.06□□□□□ -0.32
TfamP40630 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
TfamP40630 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TfamP40630 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.05□□□□□ -0.32
TfamP40630 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.05□□□□□ -0.32
TfamP40630 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TfamP40630 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.05□□□□□ -0.32
TfamP40630 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TfamP40630 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TfamP40630 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.05□□□□□ -0.32
TfamP40630 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TfamP40630 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.05□□□□□ -0.32
TfamP40630 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TfamP40630 Gm13453-201ENSMUST00000118708 357 ntBASIC13.05□□□□□ -0.32
TfamP40630 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.05□□□□□ -0.32
TfamP40630 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms