Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.61□□□□□ -0.55
Slc6a1P31648 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Slc6a1P31648 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.61□□□□□ -0.55
Slc6a1P31648 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.61□□□□□ -0.55
Slc6a1P31648 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.61□□□□□ -0.55
Slc6a1P31648 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Slc6a1P31648 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.61□□□□□ -0.55
Slc6a1P31648 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a1P31648 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.6□□□□□ -0.55
Slc6a1P31648 Gm17968-201ENSMUST00000194902 784 ntBASIC11.6□□□□□ -0.55
Slc6a1P31648 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.6□□□□□ -0.55
Slc6a1P31648 Gm44719-201ENSMUST00000206404 149 ntBASIC11.6□□□□□ -0.55
Slc6a1P31648 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.6□□□□□ -0.55
Slc6a1P31648 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc6a1P31648 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc6a1P31648 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm44872-201ENSMUST00000207864 420 ntBASIC11.59□□□□□ -0.55
Slc6a1P31648 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc6a1P31648 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.59□□□□□ -0.55
Slc6a1P31648 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.59□□□□□ -0.55
Slc6a1P31648 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Matn2-203ENSMUST00000226766 3252 ntBASIC11.59□□□□□ -0.55
Slc6a1P31648 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms