Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.86□□□□□ -0.51
Ccl3P10855 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccl3P10855 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl3P10855 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ccl3P10855 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl3P10855 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccl3P10855 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.85□□□□□ -0.51
Ccl3P10855 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccl3P10855 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.85□□□□□ -0.51
Ccl3P10855 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.85□□□□□ -0.51
Ccl3P10855 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccl3P10855 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl3P10855 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Ccl3P10855 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccl3P10855 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccl3P10855 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm17376-201ENSMUST00000166016 84 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm4768-201ENSMUST00000206199 686 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl3P10855 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.84□□□□□ -0.51
Ccl3P10855 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl3P10855 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms