Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm12859-201ENSMUST00000117834 427 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm12341-201ENSMUST00000119724 503 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Mir7654-201ENSMUST00000185082 70 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm18307-201ENSMUST00000206864 949 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Gm18624-201ENSMUST00000220966 658 ntBASIC11.73□□□□□ -0.53
PtcraP0C6B2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
PtcraP0C6B2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PtcraP0C6B2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.72□□□□□ -0.53
PtcraP0C6B2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
PtcraP0C6B2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PtcraP0C6B2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PtcraP0C6B2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.71□□□□□ -0.53
PtcraP0C6B2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PtcraP0C6B2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PtcraP0C6B2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PtcraP0C6B2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms