Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Grk6-205ENSMUST00000224653 2976 ntBASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp6P0C0A3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp6P0C0A3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gm15240-201ENSMUST00000118156 720 ntBASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Chmp6P0C0A3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms