Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tuba1bP05213 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
Tuba1bP05213 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tuba1bP05213 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.58□□□□□ -0.39
Tuba1bP05213 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tuba1bP05213 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.58□□□□□ -0.4
Tuba1bP05213 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tuba1bP05213 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gm8410-201ENSMUST00000117225 605 ntBASIC12.58□□□□□ -0.4
Tuba1bP05213 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.58□□□□□ -0.4
Tuba1bP05213 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
Tuba1bP05213 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.58□□□□□ -0.4
Tuba1bP05213 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gm22175-201ENSMUST00000175007 78 ntBASIC12.58□□□□□ -0.4
Tuba1bP05213 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.58□□□□□ -0.4
Tuba1bP05213 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tuba1bP05213 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tuba1bP05213 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.58□□□□□ -0.4
Tuba1bP05213 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm6415-201ENSMUST00000118488 348 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Mir6956-201ENSMUST00000183598 62 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm29541-201ENSMUST00000191351 678 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.57□□□□□ -0.4
Tuba1bP05213 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tuba1bP05213 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.57□□□□□ -0.4
Tuba1bP05213 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Tuba1bP05213 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.56□□□□□ -0.4
Tuba1bP05213 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tuba1bP05213 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.56□□□□□ -0.4
Tuba1bP05213 Gm18766-201ENSMUST00000189811 808 ntBASIC12.56□□□□□ -0.4
Tuba1bP05213 Gm38294-201ENSMUST00000192831 381 ntBASIC12.56□□□□□ -0.4
Tuba1bP05213 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tuba1bP05213 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.56□□□□□ -0.4
Tuba1bP05213 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms