Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Gm38223-201ENSMUST00000194484 695 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.54□□□□□ -0.08
Vti1aO89116 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 Gm7561-201ENSMUST00000211203 886 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.54□□□□□ -0.08
Vti1aO89116 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.53□□□□□ -0.08
Vti1aO89116 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1aO89116 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Vti1aO89116 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.53□□□□□ -0.08
Vti1aO89116 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Vti1aO89116 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1aO89116 Gm29741-201ENSMUST00000192667 421 ntBASIC14.53□□□□□ -0.08
Vti1aO89116 Gm10478-201ENSMUST00000084451 396 ntBASIC14.53□□□□□ -0.08
Vti1aO89116 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vti1aO89116 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vti1aO89116 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.53□□□□□ -0.08
Vti1aO89116 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Vti1aO89116 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vti1aO89116 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vti1aO89116 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.52□□□□□ -0.08
Vti1aO89116 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vti1aO89116 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.52□□□□□ -0.08
Vti1aO89116 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.52□□□□□ -0.08
Vti1aO89116 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vti1aO89116 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.52□□□□□ -0.09
Vti1aO89116 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.52□□□□□ -0.09
Vti1aO89116 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.52□□□□□ -0.09
Vti1aO89116 Gm42550-201ENSMUST00000201553 960 ntBASIC14.52□□□□□ -0.09
Vti1aO89116 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Vti1aO89116 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vti1aO89116 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vti1aO89116 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.52□□□□□ -0.09
Vti1aO89116 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vti1aO89116 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vti1aO89116 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vti1aO89116 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms