Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Setdb1O88974 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Setdb1O88974 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Setdb1O88974 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.42■□□□□ 0.22
Setdb1O88974 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.42■□□□□ 0.22
Setdb1O88974 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.42■□□□□ 0.22
Setdb1O88974 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Setdb1O88974 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Setdb1O88974 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Setdb1O88974 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Setdb1O88974 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.41■□□□□ 0.22
Setdb1O88974 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Setdb1O88974 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.41■□□□□ 0.22
Setdb1O88974 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Setdb1O88974 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.41■□□□□ 0.22
Setdb1O88974 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Setdb1O88974 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Setdb1O88974 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.41■□□□□ 0.22
Setdb1O88974 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.41■□□□□ 0.22
Setdb1O88974 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Setdb1O88974 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Setdb1O88974 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Setdb1O88974 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Setdb1O88974 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.4■□□□□ 0.22
Setdb1O88974 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.4■□□□□ 0.22
Setdb1O88974 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Setdb1O88974 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.4■□□□□ 0.22
Setdb1O88974 Gm14381-201ENSMUST00000122105 414 ntBASIC16.4■□□□□ 0.22
Setdb1O88974 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.4■□□□□ 0.22
Setdb1O88974 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.4■□□□□ 0.22
Setdb1O88974 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
Setdb1O88974 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Setdb1O88974 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Setdb1O88974 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Setdb1O88974 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Setdb1O88974 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Setdb1O88974 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.39■□□□□ 0.21
Setdb1O88974 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.39■□□□□ 0.21
Setdb1O88974 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Setdb1O88974 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Setdb1O88974 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Setdb1O88974 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Setdb1O88974 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Setdb1O88974 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Setdb1O88974 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms