Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.4■□□□□ 0.22
Cops6O88545 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cops6O88545 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cops6O88545 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.39■□□□□ 0.22
Cops6O88545 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.39■□□□□ 0.21
Cops6O88545 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.39■□□□□ 0.21
Cops6O88545 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cops6O88545 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.39■□□□□ 0.21
Cops6O88545 Gm11793-201ENSMUST00000120433 981 ntBASIC16.39■□□□□ 0.21
Cops6O88545 Gm16479-201ENSMUST00000121706 932 ntBASIC16.39■□□□□ 0.21
Cops6O88545 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.39■□□□□ 0.21
Cops6O88545 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.39■□□□□ 0.21
Cops6O88545 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.39■□□□□ 0.21
Cops6O88545 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.39■□□□□ 0.21
Cops6O88545 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.39■□□□□ 0.21
Cops6O88545 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cops6O88545 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cops6O88545 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 Gm9257-201ENSMUST00000221254 232 ntBASIC16.38■□□□□ 0.21
Cops6O88545 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.38■□□□□ 0.21
Cops6O88545 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cops6O88545 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cops6O88545 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cops6O88545 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.37■□□□□ 0.21
Cops6O88545 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cops6O88545 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.37■□□□□ 0.21
Cops6O88545 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cops6O88545 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cops6O88545 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.37■□□□□ 0.21
Cops6O88545 Gm11591-201ENSMUST00000120063 702 ntBASIC16.37■□□□□ 0.21
Cops6O88545 Gm16379-201ENSMUST00000161469 348 ntBASIC16.37■□□□□ 0.21
Cops6O88545 Gm8762-201ENSMUST00000193486 339 ntBASIC16.37■□□□□ 0.21
Cops6O88545 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.37■□□□□ 0.21
Cops6O88545 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cops6O88545 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cops6O88545 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.36■□□□□ 0.21
Cops6O88545 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Cops6O88545 Gm11637-201ENSMUST00000120601 592 ntBASIC16.36■□□□□ 0.21
Cops6O88545 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cops6O88545 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.36■□□□□ 0.21
Cops6O88545 Gm38266-201ENSMUST00000194931 421 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms