Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a6O35544 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.28□□□□□ -0.28
Slc1a6O35544 Gm13365-201ENSMUST00000121188 973 ntBASIC13.28□□□□□ -0.28
Slc1a6O35544 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Gm24420-201ENSMUST00000176676 59 ntBASIC13.28□□□□□ -0.28
Slc1a6O35544 Gm4804-201ENSMUST00000182234 999 ntBASIC13.28□□□□□ -0.28
Slc1a6O35544 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.28□□□□□ -0.28
Slc1a6O35544 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc1a6O35544 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc1a6O35544 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.27□□□□□ -0.28
Slc1a6O35544 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc1a6O35544 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.27□□□□□ -0.28
Slc1a6O35544 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm24543-201ENSMUST00000103867 82 ntBASIC13.27□□□□□ -0.29
Slc1a6O35544 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm15467-201ENSMUST00000120582 445 ntBASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.27□□□□□ -0.29
Slc1a6O35544 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc1a6O35544 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc1a6O35544 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Slc1a6O35544 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Slc1a6O35544 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc1a6O35544 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.26□□□□□ -0.29
Slc1a6O35544 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms