Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hdac1O09106 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hdac1O09106 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.04■□□□□ 0.16
Hdac1O09106 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.04■□□□□ 0.16
Hdac1O09106 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm3436-201ENSMUST00000179930 840 ntBASIC16.04■□□□□ 0.16
Hdac1O09106 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm27321-201ENSMUST00000185021 205 ntBASIC16.04■□□□□ 0.16
Hdac1O09106 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm5312-201ENSMUST00000203728 547 ntBASIC16.04■□□□□ 0.16
Hdac1O09106 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.04■□□□□ 0.16
Hdac1O09106 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.04■□□□□ 0.16
Hdac1O09106 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Hdac1O09106 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hdac1O09106 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.04■□□□□ 0.16
Hdac1O09106 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hdac1O09106 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.04■□□□□ 0.16
Hdac1O09106 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.03■□□□□ 0.16
Hdac1O09106 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hdac1O09106 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hdac1O09106 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hdac1O09106 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm25948-201ENSMUST00000175334 112 ntBASIC16.03■□□□□ 0.16
Hdac1O09106 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.03■□□□□ 0.16
Hdac1O09106 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.03■□□□□ 0.16
Hdac1O09106 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.03■□□□□ 0.16
Hdac1O09106 Gm17330-201ENSMUST00000221047 165 ntBASIC16.03■□□□□ 0.16
Hdac1O09106 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hdac1O09106 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac1O09106 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.02■□□□□ 0.16
Hdac1O09106 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Hdac1O09106 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Hdac1O09106 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Hdac1O09106 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm12403-201ENSMUST00000121384 959 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms