Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.97□□□□□ -0.49
Raet1aO08602 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Raet1aO08602 Gm25925-201ENSMUST00000158314 306 ntBASIC11.97□□□□□ -0.49
Raet1aO08602 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Raet1aO08602 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raet1aO08602 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Raet1aO08602 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Grk6-205ENSMUST00000224653 2976 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Gm12485-201ENSMUST00000119641 291 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.96□□□□□ -0.49
Raet1aO08602 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Gm43094-201ENSMUST00000196549 921 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Gm17330-201ENSMUST00000221047 165 ntBASIC11.96□□□□□ -0.49
Raet1aO08602 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.96□□□□□ -0.49
Raet1aO08602 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.96□□□□□ -0.49
Raet1aO08602 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Raet1aO08602 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.96□□□□□ -0.5
Raet1aO08602 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.96□□□□□ -0.5
Raet1aO08602 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Raet1aO08602 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Raet1aO08602 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Raet1aO08602 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Raet1aO08602 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm16215-201ENSMUST00000161990 637 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.95□□□□□ -0.5
Raet1aO08602 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.95□□□□□ -0.5
Raet1aO08602 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.95□□□□□ -0.5
Raet1aO08602 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Raet1aO08602 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Raet1aO08602 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms