Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
B020004C17RikJ3QP07 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
B020004C17RikJ3QP07 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gm31256-201ENSMUST00000194705 506 ntBASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Rps4l-202ENSMUST00000204242 789 ntBASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gm13097-201ENSMUST00000210722 397 ntBASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
B020004C17RikJ3QP07 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Snord83b-201ENSMUST00000104546 94 ntBASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Gm45186-201ENSMUST00000206874 478 ntBASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
B020004C17RikJ3QP07 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
B020004C17RikJ3QP07 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms