Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.82□□□□□ -0.2
Trim55G3X8Y1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Gm12644-201ENSMUST00000119935 606 ntBASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.82□□□□□ -0.2
Trim55G3X8Y1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Gm18195-201ENSMUST00000207604 706 ntBASIC13.82□□□□□ -0.2
Trim55G3X8Y1 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim55G3X8Y1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Gm18733-201ENSMUST00000173950 856 ntBASIC13.81□□□□□ -0.2
Trim55G3X8Y1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Olfr286-202ENSMUST00000205305 969 ntBASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.81□□□□□ -0.2
Trim55G3X8Y1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim55G3X8Y1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms