Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clca3bE9PUL3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clca3bE9PUL3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clca3bE9PUL3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Clca3bE9PUL3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clca3bE9PUL3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clca3bE9PUL3 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.46□□□□□ -0.1
Clca3bE9PUL3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.46□□□□□ -0.1
Clca3bE9PUL3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.46□□□□□ -0.1
Clca3bE9PUL3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms