Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm16379-201ENSMUST00000161469 348 ntBASIC12.08□□□□□ -0.48
Shank1D3YZU1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.08□□□□□ -0.48
Shank1D3YZU1 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.08□□□□□ -0.48
Shank1D3YZU1 Gm8762-201ENSMUST00000193486 339 ntBASIC12.08□□□□□ -0.48
Shank1D3YZU1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Shank1D3YZU1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.08□□□□□ -0.48
Shank1D3YZU1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shank1D3YZU1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm3890-201ENSMUST00000182416 207 ntBASIC12.07□□□□□ -0.48
Shank1D3YZU1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm10608-202ENSMUST00000213924 676 ntBASIC12.07□□□□□ -0.48
Shank1D3YZU1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.07□□□□□ -0.48
Shank1D3YZU1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.07□□□□□ -0.48
Shank1D3YZU1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shank1D3YZU1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm20482-202ENSMUST00000174729 825 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm8227-201ENSMUST00000223306 571 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm24255-201ENSMUST00000104481 128 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shank1D3YZU1 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.06□□□□□ -0.48
Shank1D3YZU1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shank1D3YZU1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms