Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col4a6B1AVK5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col4a6B1AVK5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col4a6B1AVK5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm24749-201ENSMUST00000157838 343 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm28450-201ENSMUST00000187349 638 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm39404-201ENSMUST00000216350 313 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col4a6B1AVK5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.57□□□□□ -0.24
Col4a6B1AVK5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col4a6B1AVK5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm16296-201ENSMUST00000159905 325 ntBASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col4a6B1AVK5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms