Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc194A0A140LIT1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm23935-201ENSMUST00000102303 57 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm24270-201ENSMUST00000102326 57 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm24245-201ENSMUST00000157318 57 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm27680-201ENSMUST00000184192 160 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm17837-201ENSMUST00000186435 985 ntBASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc194A0A140LIT1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Gm27618-201ENSMUST00000183671 60 ntBASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc194A0A140LIT1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccdc194A0A140LIT1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms