Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm26927-201ENSMUST00000182385 965 ntBASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcb1Q9Z0H3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcb1Q9Z0H3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms