Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn8aQ9WTU3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn8aQ9WTU3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.47□□□□□ -0.25
Scn8aQ9WTU3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms