Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Gm15370-201ENSMUST00000117158 253 ntBASIC15.74■□□□□ 0.11
Scn11aQ9R053 Gm13297-201ENSMUST00000120205 934 ntBASIC15.74■□□□□ 0.11
Scn11aQ9R053 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn11aQ9R053 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm25043-201ENSMUST00000158604 212 ntBASIC15.73■□□□□ 0.11
Scn11aQ9R053 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm19931-201ENSMUST00000198920 368 ntBASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.73■□□□□ 0.11
Scn11aQ9R053 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn11aQ9R053 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.73■□□□□ 0.11
Scn11aQ9R053 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm13316-201ENSMUST00000140537 691 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm17208-201ENSMUST00000168388 535 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm25732-201ENSMUST00000175168 60 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm21769-201ENSMUST00000211922 111 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.72■□□□□ 0.11
Scn11aQ9R053 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn11aQ9R053 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn11aQ9R053 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn11aQ9R053 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.71■□□□□ 0.11
Scn11aQ9R053 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scn11aQ9R053 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Scn11aQ9R053 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn11aQ9R053 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms