Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdc40Q9DC48 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Mir698-201ENSMUST00000102164 109 ntBASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdc40Q9DC48 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Gm15824-201ENSMUST00000119516 955 ntBASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdc40Q9DC48 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Gm12341-201ENSMUST00000119724 503 ntBASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Gm5279-201ENSMUST00000199575 745 ntBASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.54□□□□□ -0.4
Cdc40Q9DC48 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Mir497b-201ENSMUST00000093601 125 ntBASIC12.54□□□□□ -0.4
Cdc40Q9DC48 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.54□□□□□ -0.4
Cdc40Q9DC48 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms