Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm11452-201ENSMUST00000122376 690 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm27301-201ENSMUST00000184012 127 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Mir7071-201ENSMUST00000184847 69 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm13036-201ENSMUST00000117799 748 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm12882-201ENSMUST00000121696 517 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Gm15590-201ENSMUST00000078419 552 ntBASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3a3Q9D554 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sf3a3Q9D554 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.64□□□□□ -0.23
Sf3a3Q9D554 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gm27920-201ENSMUST00000183953 96 ntBASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gm34391-201ENSMUST00000203706 907 ntBASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3a3Q9D554 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms