Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim42Q9D2H5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 AA619741-201ENSMUST00000195095 646 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim42Q9D2H5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.51□□□□□ -0.25
Trim42Q9D2H5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gm6973-201ENSMUST00000117080 721 ntBASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim42Q9D2H5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms