Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.9■□□□□ 0.14
Smc3Q9CW03 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc3Q9CW03 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm6912-201ENSMUST00000117218 544 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm6736-201ENSMUST00000166583 948 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm27430-201ENSMUST00000184585 107 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gm44333-201ENSMUST00000197168 107 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.89■□□□□ 0.13
Smc3Q9CW03 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc3Q9CW03 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm38294-201ENSMUST00000192831 381 ntBASIC15.88■□□□□ 0.13
Smc3Q9CW03 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm44344-201ENSMUST00000200287 129 ntBASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm5425-201ENSMUST00000214125 459 ntBASIC15.88■□□□□ 0.13
Smc3Q9CW03 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.88■□□□□ 0.13
Smc3Q9CW03 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc3Q9CW03 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smc3Q9CW03 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms