Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Gm27989-201ENSMUST00000184721 107 ntBASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim11Q99PQ2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Trim11Q99PQ2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Gm9522-201ENSMUST00000182394 926 ntBASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Gm44872-201ENSMUST00000207864 420 ntBASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim11Q99PQ2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.38■□□□□ 0.05
Trim11Q99PQ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trim11Q99PQ2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms