Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Gm45668-201ENSMUST00000211271 493 ntBASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.14□□□□□ -0.15
Pcdha3Q91Y16 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdha3Q91Y16 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Mir6392-201ENSMUST00000184924 108 ntBASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdha3Q91Y16 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha3Q91Y16 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms