Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm15429-201ENSMUST00000151268 798 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm23984-201ENSMUST00000157139 203 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm27701-201ENSMUST00000184498 110 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm29608-201ENSMUST00000190444 463 ntBASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha9Q91Y11 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Gm15678-201ENSMUST00000117573 960 ntBASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha9Q91Y11 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Gm26315-201ENSMUST00000083890 321 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.34□□□□□ -0.11
Pcdha9Q91Y11 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha9Q91Y11 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdha9Q91Y11 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms